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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11780017 chr8:14881701 C/T TNKS chr8:9413424-9639856:+ 0.63 7.73 9.29E-14 Box Plot
BLCA rs11780017 chr8:14881701 C/T VPS37A chr8:17104080-17159936:+ 0.59 6.01 4.38E-9 Box Plot
BLCA rs11780017 chr8:14881701 C/T WRN chr8:30891317-31031285:+ 0.58 6.68 8.54E-11 Box Plot
BLCA rs11780017 chr8:14881701 C/T XPO7 chr8:21777182-21864096:+ 0.64 6.45 3.29E-10 Box Plot
BLCA rs11782984 chr8:17177254 C/T TNKS chr8:9413424-9639856:+ -0.4 -6.38 4.97E-10 Box Plot
BLCA rs117849070 chr7:33047574 T/A FKBP9L chr7:55748767-55780945:- 0.33 7.83 4.83E-14 Box Plot
BLCA rs117954661 chr12:72183860 C/A SNORA8 chrX:132286782-132286920:+ -0.69 -6.17 1.7E-9 Box Plot
BLCA rs11800645 chr1:162248078 G/T TAF1 chrX:70586089-70752224:+ 0.44 6.06 3.31E-9 Box Plot
BLCA rs11802514 chr1:121171050 G/T NBPF14 chr1:148003642-148025863:- 0.29 6.43 3.86E-10 Box Plot
BLCA rs11806625 chr1:47954924 C/A ENTPD2 chr9:139942550-139948497:- -0.61 -6.16 1.81E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T ANAPC16 chr10:73975758-73995618:+ -0.69 -7.13 5.07E-12 Box Plot
BLCA rs11812594 chr10:68711902 C/T AP3M1 chr10:75880013-75910821:- -0.63 -6.06 3.29E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T CHCHD1 chr10:75541805-75543410:+ -0.57 -6.53 2.13E-10 Box Plot
BLCA rs11812594 chr10:68711902 C/T COX15 chr10:101471601-101491857:- -0.65 -6.21 1.37E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T DDX50 chr10:70661034-70706603:+ -0.66 -6.7 7.55E-11 Box Plot